The Pleiades Promoter Project

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All MiniPromoters

Ple79-cre/EGFP (Negative)

Other constructs for this MiniPromoter: Ple79-EGFP (Negative)

Other constructs for this Gene: Ple77-Cre/EGFP (Negative), Ple78-EGFP (Negative), Ple80-Cre/EGFP (Negative)

7.7 weeks, N2, Male
(entire series)

Ple79-EGFP/cre Description:

This Ple79 promoter construct is derived from the promoter region of the gamma-aminobutyric acid receptor, subunit alpha 6 (GABRA6) gene. The Pleiades Promoter Project constructed a 998 bp MiniPromoter derived from an intronic putative regulatory region combined with a subregion of the GABRA6 promoter and introduced it into the multiple cloning site (MCS) of Pleiades expression vector pEMS1040 (cre/EGFP reporter flanked by minimal frt sites) to make plasmid pEMS1059 with Ple79 driving cre/EGFP. The Ple79-cre/EGFP (pEMS1059) was introduced by homologous recombination as a single copy insertion into the Hprt1b-m3 locus in the X chromosome of mouse embryonic stem cells (ESCs) mEMS21. Four ESC lines (mEMS524, mEMS525, mEMS526, and mEMS528) were PCR validated. Chimeras were generated using mEMS525.

Note: Promoterless negative controls (pEMS1302, pEMS1306, pEMS1313) have been generated, as well as CAG positive controls (pEMS1157, pEMS1277 & pEMS1488).

Ple79-EGFP/cre Expression Pattern:

MiniPromoter Ple79 was assayed for LacZ and EGFP from pEMS1040 backbone. No xGal reaction was detected in numerous brain regions and retina. No EGFP expression was detected above background in native fluorescence under epi or confocal microscopy. Anti GFP immunostaining (rabbit polyclonal, Invitrogen) did not detect specific GFP expression above background across numerous brain regions and retina (brightfield).

Ple79 MiniPromoter Resources:

Ple79-cre/EGFP
	plasmid pEMS1059 (in backbone pEMS1040)
	ESCs mEMS524, mEMS525, mEMS526, and mEMS528
	mice generated using ESC mEMS525
Resource Files
	Ple79 pEMS1059 Sequence	Jones lab
	Ple79 pEMS1059 MiniPromoter Design	Wasserman lab
	Ple79 pEMS1059 Vector NTI File (Requires VectorNTI Sofware)	Holt lab
	Ple79 pEMS1059 Vector Map	Holt lab
	Ple79 pEMS1059 Vector Map (Requires VectorNTI Sofware)	Holt lab
	Ple79 pEMS1059 Genotyping Assay (Requires VectorNTI Sofware)	Holt lab
	Ple79 pEMS1059 Genotyping Assay	Simpson lab
	Ple79 pEMS1059 ESC description	Simpson lab
	Ple79 pEMS1059 Mouse description	Simpson lab

Publications:

Reference	PubMed ID
Jones A, Korpi ER, McKernan RM, Pelz R, Nusser Z, Makela R, Mellor JR, Pollard S, Bahn S, Stephenson FA, Randall AD, Sieghart W, Somogyi P, Smith AJ, Wisden W. Ligand-gated ion channel subunit partnerships: GABAA receptor alpha6 subunit gene inactivation inhibits delta subunit expression. J Neurosci. 1997 Feb 15;17(4):1350-62.	9006978
Bahn S, Jones A, Wisden W. Directing gene expression to cerebellar granule cells using gamma-aminobutyric acid type A receptor alpha6 subunit transgenes. Proc Natl Acad Sci U S A. 1997 Aug 19;94(17):9417-21.	9256497
Wang W, Stock RE, Gronostajski RM, Wong YW, Schachner M, Kilpatrick DL. A role for nuclear factor I in the intrinsic control of cerebellar granule neuron gene expression. J Biol Chem. 2004 Dec 17;279(51):53491-7. Epub 2004 Oct 1.	15466411
McLean PJ, Shpektor D, Bandyopadhyay S, Russek SJ, Farb DH. A minimal promoter for the GABA(A) receptor alpha6-subunit gene controls tissue specificity. J Neurochem. 2000 May;74(5):1858-69.	10800928
Jones A, Bahn S, Grant AL, Kohler M, Wisden W. Characterization of a cerebellar granule cell-specific gene encoding the gamma-aminobutyric acid type A receptor alpha 6 subunit. J Neurochem. 1996 Sep;67(3):907-16.	8752095
Zheng T, Santi MR, Bovolin P, Marlier LN, Grayson DR. Developmental expression of the alpha 6 GABAA receptor subunit mRNA occurs only after cerebellar granule cell migration. Brain Res Dev Brain Res. 1993 Sep 17;75(1):91-103.	8222213
Wang W, Shin Y, Shi M, Kilpatrick DL. Temporal Control of a Dendritogenesis-Linked Gene via Rest-Dependent Regulation of Nuclear Factor I Occupancy. Mol Biol Cell. 2011 Jan 26; [Epub ahead of print]	21270437